Secale cereale

Common Names: cultivated annual rye

Ethnobotanical Studies

Studies

A mixture of grass-legume cover crop species may ameliorate water stress in a changing climate.

Truong NQ et al (2024).
AoB Plants.
DOI:
10.1093/aobpla/plae039
PubMed:
39114598

The LTAR Cropland Common Experiment in the Upper Chesapeake Bay.

Dell CJ et al (2024).
J Environ Qual.
DOI:
10.1002/jeq2.20606
PubMed:
39086206

Disomic chromosome 3R(3B) substitution causes a complex of meiotic abnormalities in bread wheat Triticum aestivum L.

Genetics
Zhuravleva АА and Silkova ОG (2024).
Vavilovskii Zhurnal Genet Selektsii.
DOI:
10.18699/vjgb-24-42
PubMed:
39027125

Molecular cytogenetic characteristics of new spring bread wheat introgressive lines resistant to stem rust.

Baranova OA, Adonina IG and Sibikeev SN (2024).
Vavilovskii Zhurnal Genet Selektsii.
DOI:
10.18699/vjgb-24-43
PubMed:
39027121

Cytogenetic analysis of meiotic behaviour and stability in a trigeneric hybrid (triticale x trigopiro).

Fradkin M et al (2024).
Protoplasma.
DOI:
10.1007/s00709-024-01964-9
PubMed:
38954027

Alien Chromatin from Hordeeae Grasses Enhances the Compatibility of Epichloë Endophyte Symbiosis with the Hexaploid Wheat Triticum aestivum.

Simpson WR et al (2024).
J Fungi (Basel).
DOI:
10.3390/jof10060384
PubMed:
38921370

Wholegrain triticale sourdough: Effects of triticale:Wheat flour ratio and hydration level on bread quality.

Messina V et al (2024).
Food Sci Nutr.
DOI:
10.1002/fsn3.4050
PubMed:
38873465

The LTAR Common Experiment at Upper Chesapeake Bay: Integrated.

Soder KJ et al (2024).
J Environ Qual.
DOI:
10.1002/jeq2.20591
PubMed:
38872323

Usefulness of alien sterilizing cytoplasms for the hybrid breeding of triticale (xTriticosecale Wittmack): preliminary results.

Simlat M et al (2024).
J Appl Genet.
DOI:
10.1007/s13353-024-00882-z
PubMed:
38871973

Transcriptomic analysis reveals the regulatory mechanisms of messenger RNA (mRNA) and long non-coding RNA (lncRNA) in response to waterlogging stress in rye (Secale cereale L.).

Genetics
Bimpong D et al (2024).
BMC Plant Biol.
DOI:
10.1186/s12870-024-05234-x
PubMed:
38862913

Genome-wide identification and phylogenetic and expression pattern analyses of EPF/EPFL family genes in the Rye (Secale cereale L.).

Genetics
Zhiling L, Wenhua D and Fangyuan Z (2024).
BMC Genomics.
DOI:
10.1186/s12864-024-10425-9
PubMed:
38816796

Unveiling the distinctive traits of functional rye centromeres: minisatellites, retrotransposons, and R-loop formation.

Liu C et al (2024).
Sci China Life Sci.
DOI:
10.1007/s11427-023-2524-0
PubMed:
38805064

Genome-wide identification of the plant homeodomain-finger family in rye and ScPHD5 functions in cold tolerance and flowering time.

Genetics
Jung WJ et al (2024).
Plant Cell Rep.
DOI:
10.1007/s00299-024-03226-7
PubMed:
38744747

The freeze-thaw cycle exacerbates the ecotoxicity of polystyrene nanoplastics to Secale cereale L. seedlings.

Pan X et al (2024).
Plant Physiol Biochem.
DOI:
10.1016/j.plaphy.2024.108716
PubMed:
38744087

Assessment of induced allelopathy in crop-weed co-culture with rye-pigweed model.

Mushtaq W, Fauconnier ML and de Clerck C (2024).
Sci Rep.
DOI:
10.1038/s41598-024-60663-w
PubMed:
38714777

Winter rye cover crops shelter competent squash phyllosphere bacteria to reduce Pseudomonas syringae pv. lachrymans growth and angular leaf spot symptoms.

Maglione R et al (2024).
Phytopathology.
DOI:
10.1094/PHYTO-08-22-0291-R
PubMed:
38648089

Identification of quantitative trait loci associated with leaf rust resistance in rye by precision mapping.

Mateusz M et al (2024).
BMC Plant Biol.
DOI:
10.1186/s12870-024-04960-6
PubMed:
38632518

Genotype-Specific Expression of Selected Candidate Genes Conferring Resistance to Leaf Rust of Rye (Secale cereale L.).

Genetics
Azad R et al (2024).
Genes (Basel).
DOI:
10.3390/genes15030275
PubMed:
38540334

Assessing corn recovery from early season nutrient stress under different soil moisture regimes.

Amissah S et al (2024).
Front Plant Sci.
DOI:
10.3389/fpls.2024.1344022
PubMed:
38510438

Leaf rust (Puccinia recondita f. sp. secalis) triggers substantial changes in rye (Secale cereale L.) at the transcriptome and metabolome levels.

Genetics
Krępski T et al (2024).
BMC Plant Biol.
DOI:
10.1186/s12870-024-04726-0
PubMed:
38347436

Influence of Grazing on Canola Grain, Canola Forage Yield, and Beef Cattle Performance.

Lauriault LM et al (2024).
Animals (Basel).
DOI:
10.3390/ani14030371
PubMed:
38338014

Scald resistance in hybrid rye (Secale cereale): genomic prediction and GWAS.

Madsen MD et al (2024).
Front Plant Sci.
DOI:
10.3389/fpls.2024.1306591
PubMed:
38304738

Analysis of Petrogenic Hydrocarbons in Plant Tissues: A Simple GC-MS-Based Protocol to Distinguish Biogenic Hydrocarbons from Diesel-Derived Compounds.

Collina E et al (2024).
Plants (Basel).
DOI:
10.3390/plants13020298
PubMed:
38276755

Enhancing estimation of cover crop biomass using field-based high-throughput phenotyping and machine learning models.

Bai G et al (2024).
Front Plant Sci.
DOI:
10.3389/fpls.2023.1277672
PubMed:
38259938

Comparative assessment of the copy number of satellite repeats in the genome of Triticeae species.

Summary

The study compared the copy number of satellite repeats in Triticeae species. Different levels of variability were identified, and specific copy numbers were found in certain species. This information can be used for evolutionary and population studies of Triticeae species.

Genetics
Kroupin PY et al (2023).
Vavilovskii Zhurnal Genet Selektsii.
DOI:
10.18699/VJGB-23-109
PubMed:
38239964

Basic helix-loop-helix (bHLH) gene family in rye (Secale cereale L.): genome-wide identification, phylogeny, evolutionary expansion and expression analyses.

Summary

Study analyzed the bHLH transcription factor family in rye, a hardy crop plant, to understand its role in plant development and stress responses. This knowledge can be useful for improving crop resilience and yield.

Genetics
Chen X et al (2024).
BMC Genomics.
DOI:
10.1186/s12864-023-09911-3
PubMed:
38233751

GRAS gene family in rye (Secale cereale L.): genome-wide identification, phylogeny, evolutionary expansion and expression analyses.

Summary

Researchers analyzed the GRAS transcription factor family in rye, finding it plays important roles in plant development and stress response. This knowledge can improve our understanding of rye's potential use in agriculture and breeding programs.

Genetics
Fan Y et al (2024).
BMC Plant Biol.
DOI:
10.1186/s12870-023-04674-1
PubMed:
38216860

Soil texture, fertilization, cover crop species and management affect nitrous oxide emissions from no-till cropland.

Sedghi N, Cavigelli M and Weil RR (2024).
Sci Total Environ.
DOI:
10.1016/j.scitotenv.2024.169991
PubMed:
38215843

The alternative host with the most: Understanding the ecology of Xanthomonas hortorum pv. carotae on non-carrot crops in central Oregon.

Baldino K, Scott JC and Dung JKS (2024).
Plant Dis.
DOI:
10.1094/PDIS-08-23-1631-RE
PubMed:
38213121

Two functional CC-NBS-LRR proteins from rye chromosome 6RS confer differential age-related powdery mildew resistance to wheat.

Genetics
Han G et al (2024).
Plant Biotechnol J.
DOI:
10.1111/pbi.14165
PubMed:
38153293

Development of a Set of Wheat-Rye Derivative Lines from Hexaploid Triticale with Complex Chromosomal Rearrangements to Improve Disease Resistance, Agronomic and Quality Traits of Wheat.

Summary

Scientists used a hexaploid triticale called Yukuri to transfer valuable genes from rye into wheat, creating wheat-rye introgression lines. These lines showed resistance to diseases and improved agronomic traits, making them valuable for wheat improvement programs.

Genetics
Wang T et al (2023).
Plants (Basel).
DOI:
10.3390/plants12223885
PubMed:
38005782

Malate production, sugar metabolism, and redox homeostasis in the leaf growth zone of Rye (Secale cereale) increase stress tolerance to aluminum stress: A biochemical and genome-wide transcriptional study.

Summary

This study shows that global soil acidification is increasing aluminum availability, hindering plant growth. It identifies genes associated with stress response and detoxification in rye, suggesting that Al tolerance is linked to exclusion from leaf meristem.

Genetics
Donnelly CP et al (2023).
J Hazard Mater.
DOI:
10.1016/j.jhazmat.2023.132956
PubMed:
37976853

Cover crop performance under a changing climate in continuous corn system over nebraska.

Birru G et al (2023).
J Environ Qual.
DOI:
10.1002/jeq2.20526
PubMed:
37889790

Genome-wide identification, phylogenetic and expression pattern analysis of HSF family genes in the Rye (Secale cereale L.).

Summary

Researchers identified and analyzed the HSF gene family in Rye, a plant species. Understanding these genes can help in improving plant growth and development, and in dealing with stress.

Genetics
Ren Y et al (2023).
BMC Plant Biol.
DOI:
10.1186/s12870-023-04418-1
PubMed:
37726665

Evaluation of phosphate rock as the only source of phosphorus for the growth of tall and semi-dwarf durum wheat and rye plants using digital phenotyping.

Bazhenov M et al (2023).
PeerJ.
DOI:
10.7717/peerj.15972
PubMed:
37663276

Root growth of monocotyledons and dicotyledons is limited by different tissues.

Petrova A, Ageeva M and Kozlova L (2023).
Plant J.
DOI:
10.1111/tpj.16440
PubMed:
37646760

A perennial living mulch system fosters a more diverse and balanced soil bacterial community.

Li H, Hill N and Wallace J (2023).
PLoS One.
DOI:
10.1371/journal.pone.0290608
PubMed:
37643167

Characteristic of the gene candidate SecARS encoding alkylresorcinol synthase in Secale.

Summary

Scientists identified and studied the gene responsible for producing alkylresorcinols (ARs) in rye, which are compounds with antimicrobial, antifungal, and cytotoxic properties. Understanding this gene and its products could have positive implications for human health.

Genetics
Targońska-Karasek M et al (2023).
Mol Biol Rep.
DOI:
10.1007/s11033-023-08684-y
PubMed:
37615923

Data quantifying interseeded cover crops effects on soil water and corn productivity in corn-soybean-wheat no-till cropping systems.

Schomberg HH et al (2023).
Data Brief.
DOI:
10.1016/j.dib.2023.109465
PubMed:
37600596

Profiling of Barley, Wheat, and Rye FPG and OGG1 Genes during Grain Germination.

Summary

This research studied gene expression during grain germination in barley, wheat, and rye. The study found differences in gene expression levels specific to each species, providing new information for understanding the germination process in cereals.

Genetics
Kowalik S and Groszyk J (2023).
Int J Mol Sci.
DOI:
10.3390/ijms241512354
PubMed:
37569728

Effects of harvest stages and lactic acid bacteria additives on the nutritional quality of silage derived from triticale, rye, and oat on the Qinghai-Tibet Plateau.

Ma J et al (2023).
PeerJ.
DOI:
10.7717/peerj.15772
PubMed:
37551342

Development of novel wheat-rye 6RS small fragment translocation lines with powdery mildew resistance and physical mapping of the resistance gene PmW6RS.

Genetics
Wang J et al (2023).
Theor Appl Genet.
DOI:
10.1007/s00122-023-04433-8
PubMed:
37548696

Daily assessment of malting-induced changes in the volatile composition of barley (Hordeum vulgare L.), rye (Secale cereale L.), and quinoa (Chenopodium quinoa Willd.).

Almaguer C et al (2023).
J Food Sci.
DOI:
10.1111/1750-3841.16717
PubMed:
37530626

Comparative study of the impact of malting on the aroma profiles of barley (Hordeum vulgare L.) and rye (Secale cereale L.).

Almaguer C et al (2023).
Food Chem.
DOI:
10.1016/j.foodchem.2023.136694
PubMed:
37418806

Selective sweeps identification in distinct groups of cultivated rye (Secale cereale L.) germplasm provides potential candidate genes for crop improvement.

Genetics
Hawliczek A et al (2023).
BMC Plant Biol.
DOI:
10.1186/s12870-023-04337-1
PubMed:
37328739

Cytological and genetic effects of rye chromosomes 1RS and 3R on the wheat-breeding founder parent Chuanmai 42 from southwestern China.

Genetics
Wan H et al (2023).
Mol Breed.
DOI:
10.1007/s11032-023-01386-0
PubMed:
37312750

Comparative genomics of Xanthomonas translucens pv. undulosa strains isolated from weedy grasses and cultivated wild rice.

Ledman KE et al (2023).
Phytopathology.
DOI:
10.1094/PHYTO-09-22-0352-SA
PubMed:
37260072

Artemisinin and Ambrosia trifida extract aggravate the effects of short freeze-thaw stress in winter rye (Secale cereale) seedlings.

Guo J et al (2023).
Funct Plant Biol.
DOI:
10.1071/FP22271
PubMed:
37105725

Abattoir residues as nutrient resources: Nitrogen recycling with bone chars and biogas digestates.

Soja G et al (2023).
Heliyon.
DOI:
10.1016/j.heliyon.2023.e15169
PubMed:
37095952

Cover crop termination options and application of remote sensing for evaluating termination efficiency.

Kumar V et al (2023).
PLoS One.
DOI:
10.1371/journal.pone.0284529
PubMed:
37079528

Plants and Other Materials Used for Dyeing in the Present Territory of Poland, Belarus and Ukraine according to Rostafiński's Questionnaire from 1883.

Köhler P, Bystry A and Łuczaj Ł (2023).
Plants (Basel).
DOI:
10.3390/plants12071482
PubMed:
37050108

Molecular structure, comparative and phylogenetic analysis of the complete chloroplast genome sequences of weedy rye Secale cereale ssp. segetale.

Genetics
Skuza L et al (2023).
Sci Rep.
DOI:
10.1038/s41598-023-32587-4
PubMed:
37012409

Detoxification mechanisms of biochar on plants in chromium contaminated soil: Chromium chemical forms and subcellular distribution.

Sun P et al (2023).
Chemosphere.
DOI:
10.1016/j.chemosphere.2023.138505
PubMed:
36965535

Effects of Leaf Properties on the Counts of Microbes on the Leaf Surfaces of Wheat, Rye, and Triticale.

Tang G et al (2023).
FEMS Microbiol Ecol.
DOI:
10.1093/femsec/fiad024
PubMed:
36918203

Exploiting Rye in Wheat Quality Breeding: The Case of Arabinoxylan Content.

Review
Piro MC, Muylle H and Haesaert G (2023).
Plants (Basel).
DOI:
10.3390/plants12040737
PubMed:
36840085

Poorly drained depressions can be hotspots of nutrient leaching from agricultural soils.

Hall SJ et al (2023).
J Environ Qual.
DOI:
10.1002/jeq2.20461
PubMed:
36763775

Development and identification of a wheat-rye breeding line for harmonious improvement between powdery mildew resistance and high yield potential.

Han G et al (2023).
Plant Dis.
DOI:
10.1094/PDIS-12-22-2817-RE
PubMed:
36724028

Genetic Redundancy in Rye Shows in a Variety of Ways.

Review
Vershinin AV, Elisafenko EA and Evtushenko EV (2023).
Plants (Basel).
DOI:
10.3390/plants12020282
PubMed:
36678994

Novel Tetraploid Triticale (Einkorn Wheat × Rye)-A Source of Stem Rust Resistance.

Kwiatek MT et al (2023).
Plants (Basel).
DOI:
10.3390/plants12020278
PubMed:
36678992

Quality of Rye Plants (Secale cereale) as Affected by Agronomic Biofortification with Iodine.

Krzepiłko A et al (2022).
Plants (Basel).
DOI:
10.3390/plants12010100
PubMed:
36616229

Population structure and genetic diversity of a germplasm for hybrid breeding in rye (Secale cereale L.) using high-density DArTseq-based silicoDArT and SNP markers.

Niedziela A and Bednarek PT (2023).
J Appl Genet.
DOI:
10.1007/s13353-022-00740-w
PubMed:
36595165

Variation between glaucous and non-glaucous near-isogenic lines of rye (Secale cereale L.) under drought stress.

Laskoś K et al (2022).
Sci Rep.
DOI:
10.1038/s41598-022-26869-6
PubMed:
36577794

The chemical journey of Europium(III) through winter rye (Secale cereale L.) - Understanding through mass spectrometry and chemical microscopy.

Stadler J et al (2023).
Chemosphere.
DOI:
10.1016/j.chemosphere.2022.137252
PubMed:
36403807

In search of the relationship between the rye polyamine oxidase (PAO) gene and resistance to powdery mildew (PM).

Milczarski P et al (2023).
J Appl Genet.
DOI:
10.1007/s13353-022-00723-x
PubMed:
36178587

Multiplexed SSR and agronomic data used in an investigation of obsolete diversity of rye (Secale cereale L.).

Targonska-Karasek M et al (2022).
Data Brief.
DOI:
10.1016/j.dib.2022.107910
PubMed:
35198686

Responses of leached nitrogen concentrations and soil health to winter rye cover crop under no-till corn-soybean rotation in the northern Great Plains.

Bawa A et al (2023).
J Environ Qual.
DOI:
10.1002/jeq2.20294
PubMed:
34609753

Screening and investigation Lactobacillius spp. to improve Secale cereale silage quality.

Kim HS et al (2017).
Anim Sci J.
DOI:
10.1111/asj.12781
PubMed:
28402035

Rye (Secale cereale L.).

Review
Altpeter F et al (2006).
Methods Mol Biol.
PubMed:
16988347

Cereal rye, Secale cereale.

Weber RW et al (2004).
Ann Allergy Asthma Immunol.
PubMed:
15104188